PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008234323.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 210aa    MW: 23052.4 Da    PI: 10.0163
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008234323.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.21.4e-133991155
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                    ++++h e+E++RR+++   ++ Lr++lP       ++K s ae   +Av+YIk+Lq
  XP_008234323.1 39 KKMMHREIEKKRRQEMAALYASLRSVLPLqY---IKGKRSLAEHMNEAVNYIKHLQ 91
                    6899*************************66...*********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.62E-123695No hitNo description
SuperFamilySSF474597.72E-1637114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.2783890IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.9E-103991IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.6E-1040104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.00774496IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MDVGMFNNIN TGGQQRKSSL ALTLDSAENQ DKSNDDGKKK MMHREIEKKR RQEMAALYAS  60
LRSVLPLQYI KGKRSLAEHM NEAVNYIKHL QTRIKLLGSR RDELMIGMSS LPSLSASSST  120
SSTSPRVAVH PCFGGVEIVI SRGGSVEQGL VLSRLLKLLL GQGLTVISCA TTQVNERLVS  180
TIQSEVSDPA WGDFSGLQQI LTESLTRFSN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008234323.11e-153PREDICTED: transcription factor bHLH120-like
SwissprotQ9FLI02e-47BH120_ARATH; Transcription factor bHLH120
TrEMBLM5XL522e-70M5XL52_PRUPE; Uncharacterized protein (Fragment)
STRINGVIT_16s0022g02240.t014e-51(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF79233125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.13e-37bHLH family protein